Browse of TCMCG005C08547 protein

CDS

Accession Number	TCMCG005C08547
gbkey	CDS
Protein Id	XP_020258376.1
Location	complement(join(22558356..22558460,22558718..22558801,22558892..22559122,22559197..22559352,22559433..22559529,22560741..22560917,22561010..22561389,22561608..22561706,22561787..22561970,22562043..22562188,22564288..22564348,22568552..22569167,22570159..22570309,22570418..22570492,22570581..22570734,22571902..22572002,22572104..22572187,22572537..22572685,22572773..22572941,22573053..22573154,22573252..22573326,22573414..22573494,22573656..22573762,22574170..22574235,22574309..22574454,22575404..22575538,22577916..22578052,22578252..22578326,22578451..22578636,22578731..22578853,22578949..22579062,22579249..22579341,22581912..22581933,22582059..22582192,22582306..22582418,22582677..22582773,22585706..22585882,22586028..22586168,22587198..22587421,22587507..22587687))
Gene	LOC109834767
GeneID	109834767
Organism	Asparagus officinalis

Protein

Length	1915aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA376608;
db_source	XM_020402787.1
Definition	rRNA biogenesis protein RRP5

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCTGCTCACGGCGAAAAGAAGAAGAAATCTCAGAAACAAAACCCTAACCATTTAGCCCCAAAATCTCAAAAACCCTTCAAAAGATCGAAGAAGGAAAAGATACCCAAAGAACCAGCTTCCACCGACTCACTCTCTACTTCTCTCCTCGTTCAAGACGACGATCCCGAGTTCCCCAGAGGAGGAGGCAGCGTTTTGAGCAGGAAAGAGGAGGCGGAGGCCCGAGCTGAGGCGGAGGCTGAGTTTGAGAAGGAGAAGAAAGAGTTTAGGAAAGGGAAAGACAGGAGGAAGAAGAAAAATGAGAGGAAGAAGCCTGCAAAGGGGGCGGATGATGAATTGGGATCGCTCTTCGGTGAAGGAGTCACCGGCAGATTGCCAAAGTTTGCCAATCGCATAACATTGAAGAATATTTCACCAAACATGAAGCTTTGGGGAGTCATCGTCGAAGTAAATCAGAAAGACCTTGTCATCGGTCTTCCTGGAGGACTAAGGGGATTTGTTCGCACAGAGGATGTGTCTGACATTGTGTTAGATAACGTGGATAAGGATACTGAAACTTACATACTTCCTAGCATCTTTCATGTTGGTCAACTTGTATCTTGCATAGTACTAACAGTTGATGACGATAAGAGAGAAGGAAGTGGACAAAAAAGGATTTGGCTGTCTCTGCATCTTAGTTTGCTGTACAAAGGCCTCACTCTGGATGCTGTTCAAGATGGGATGGTTCTTACAGCACAGGTGAAGAGTGTTGAGGACCATGGCTACATTCTTCATTTTGGAGTCCCATTGTTCACTGGGTTTCTCCCTAGGAGTGGTCAAGGTGGTGGTAAATTCCTTAAAGGCCAGTTGCTACAGTGTGCAGTGAAGAGTGTTGATAAAGTTAGAACTGTTGTTTATCTTAATGCTGATCCAGATTTGGTGTCCAAATATGTGGCCAAGGATCTAAAGGGGATTTCTATAGACCTTCTGGTTCCTGGCATGATGGTCAATGCTCGCATTCATTCTATCCTTGAGAATGGAATTATGCTCTGCTTTCTTACTTATTTTACCGGAACAGTATGTTTTTTTGAATATGATCAGAACAAGAAGGTGAATGCTCGAATTTTGTTTATAGATCCGTCATCTAGGGCTATTGGACTGACATTGAACTCTTACCATATTCAGAATAAGGTTCCTCCATCTCATGTCAAAACAGGAGATATTTATGATAATTCACGAATTTTAAGAGTTGATCGTGGAATTGGTCTCCTTCTTGAAATCCCTTCTTCTCCAAAGCCTACACCGGCATATGTCAATATATTTGATGTTGCTGACGAGGAAGGTCTGAAGCTTGAGAAGAAGTTTAGGGAAGGCAGTGAAGTTCGTGTTCGTGTTACTGGAATTAAGCATCTTGAAGGACTGGCAATGGGCACCTTAAAGGGTAGTGCTTTTGAAGGTTCTGTTTTTACTCATTCAGATGTTAAGCCTGGAATGTTACTGAAAGCTAAGGTCATTGCTGTGGAGAATTTTGGTGCAATTGTACAATTTGCAAGTGGTATAAAGGCACTTTGTCCTCTTCCGCATATGTCAGAACTTGACATCATGAAACCTCCTAAGAAATTTAAGGTTGGAGCTGAGTTACCGTTCCGCGTGCTTGGTTGCAAATCAAAGCGAATTACTGTCACACATAAGAAAACTCTAGTGAAATCGAAGCTGAACATTTTGGCTTCCTATGCTGATGCTACTGAAGGATTAATTACTCATGGATGGATTACGAAGATTGAAAAGCATGGGTGCTTTGTGAAATTTTACAATGGAGTACAGGGTTTTGCCCACAGATCGGAGCTTGCGTTGGATCCCGGAAGTGAGGCAGATGCTGTATATCATGTTGGACAAGTTGTCAAATGTAGGATAATCAGTTCAGTTGTTGCTTCCCATAATATCAACCTCAGTTTTGTGACATCTCCTAAAAGGGTTTGTCAGGATGATGTAACCAAGATTGGCAGTGTTGTTTCTGGCATTGTCGAACGTCTCACTGCTTCAGGAGTTATTTTACATGTGGATAATGCTGTGTACATGAAGGGGATGATACCTGACGAGCATTTAACAGACCACCGAGGGCAAGCCATGATGTTCAAATCTTTGTTAAGGCCTGGATACAAGTTTGATCAGCTTTTGGTGCTGGATATTGAAGGTCAGAATTTAGTCCTTTCAGCCAAATACTCGCTTCTTTGTTCTTTGCAAGAGATTCCATCGGAGGTTTCGCAGATACGTCCATTATCTGTTCTCCATGGGTATATCTGCAATGTAATTGAGGCTGGTTGCTTTGTTCGATTTCTTGGGCGCTTGACAGGATTCTCTCCCAAATATAAAGTTGCTGATGAAAAAATTGATAATCTTTTGGACGCTTTCTCTGTCGGTCAATCAGTTCGCAGTTATATCCTCAATGTTAATAGTGAAACTGGCCGGATAAAACTATCCTTGAAGCAGTCCTTATGCTTTTCAACAGATGTTTCATTTATCCAGAGCTACTTTTTAATGGAAGAAAAGATAGCAAAACTGCAATTTTCAGATGCCAAAATTTCTGATTTGAGATGGTTGGAAAGTTTCAATATTGGTGCTGTGGTTGAAGGGGAGGTGCAAGAGATGAAAGAATTTGGGTCTGTGCTCAGCTTCAAGGATCATCCTGATATTGTAGGCTTTATTGCAAATCAACATTTGGGTGGAAGTCAGTTGGAAAAGGGTTCTGTTGTTAAAGCTTTTGTTCTGGACATAGCCAAATCCGAAGGTCTTGTTGATTTATCTCTCAAGACAGAGTTAGTTGACCGTGCCAATATTGGGGCATCTAAGAATCTTTCCTCTAAAAAGAAGCGCAGAAGAGATAGGTCTACGGACTTGGAGTTGCAGCAGACAGTAAATACAATTGTGGAAATTGTGAAAGAGAATTACTTGGTGCTTTCAATTCCAGAGCATAATTATGCTATAGGATATGCTTCTCTGCTTGATTACAACACTCAAAAGCTTTCTCCAAGGCACTTCCACTATGGACAAAGCGTCGTTGCCACTGTTGGGGAAGTTCCAAGCCCCGACTCACTTGGCAGGCTTCTGCTTCTACTTAAGTGTACTACTGAAGTTTTAAAGACTTCTAGTTCTAAAAGAACCAAGAAAGCACCAAACTATGTTGTGGGGTCACTTGTTGATGCAGAGGTTATTGACATAAAGCCTCTTGAACTTGTTGTGAAATTTGGTACCGGACTTCATGGAAGAGTTCATATTACTGAGGTTGCCGAAGATGGTCATTCTTTGGACAATATGTTAAGTAAATTTAGGATTGGGCAACTTGTAAATGCACGTATTGTTTCAAAGGCACAATCTGGAAAGAAGGGAAAAGGGTATGAATGGGAATTGTCTCTTAGACCCTCTGTTCTTTCAGGGTCAGCACAAATGATTAGTGGAGAATTTAATTTCTCTGTTGGAAATATTGTTAGTGGATATGTATCGAAGGTTGACAATGAATGGGTGTGGTTAACGGTGTCACGGAATGTCAGGGCCCATATTTATATTCTTGATAGTTCTTCTGAGCCCAGTGAACTTCAGGAATTTGGAAAGCTCTATACTGTTGGACGGGCTGTGGAAGGCCGTATTATAGGTATGCATAAAGAGAAAAGGTTGTTGCGGTTATGCCCATCCATTTCTTCACTTGCTGATCGTGGAAGTTCAGCCAAAGAGATTGAAGAAAGTAATGTTTCTGATGCAACTGGTCTGGAGCATATTATGCAAGGGGATCTTATTGGGGGAAGAATTAAAAAAGTACTTCCTGGTGTTGGTGGGTTACTTGTGCAGATTGGACCTCATCGTCATGGTAGGGTTCATTATACTGAACTTTTAGATACTTGGGCATCTAATCCTCTGTCCAGATACGAGGAAGGGCAATTTGTTAAGTGCAAGGTCCTTGAAATAAGCCGTTCTTCAGATGGACTTCTTCATGTTGATTTGTCCTTGCGTACATCATTAATGGGCATCAACTCCACCATCGGGAGTGACAGCATGGATTCAATACTTGAACGGTTTGAAAACATTGAAGATCTACATCCAAACATGGAAGTCAAGGGTTATGTAAAGAATGTTACTACAAAAGGATGTTTCATTATGCTTTCTCGAAGGATTGATGCTCGAGTCCTCTTGTCAAACTTGTCTGATGATTACATTGATACCCCTGAGAAGGAGTTTCCTGTAGGATTACTCGTGCATGGCAGGGTCTTATCAGTGGATTCTTCATCAAAGAGAGTCGATGTAACATTGAAGAAAGACACTGAAAGCCAAAGAGTAAAATCAGACACAAGCTCTTTTCTCAATGTGAAAGTCGGAGATGTGATTTCTGGCTTGATTAGGCGGACTGAACCATACGGTTTATTTATCAAAATTGATAATACCAGCATGGTTGGCCTTTGTCATATATCAGAAGTGTCCGATGAGCATCTTGATAAAATTGAAGGCAAATATCAGGCCGGGGAAAGGGTTGTAGCAAAGGTTCTAAAGGTTGATGAGGAAAGGCGCCGCATATCATTGGGAATGAAGAAATCTTACATTGGTGATACCAATCATGGACAAACTGTATCTGGCCATTCTGAAAATGACAAAACTGCTGATGATCCTGTAGTTATGTATGATTCTTTGCCTACAATGCAACAGAATGATGACTCTCCACTAATCCAAGAGATTTTTAATTGCGAAGATGACCCTGCAGTTCTTTCACAAGTTCAGACAAGGGCTTCAGTCCTTCCTCTCCAGGTCTCTCTTGATCAGTCGGACAGTTCTGACATGGAAGATGCAAGTGAAAAGCAGGATAGTATTGGACAGAACAACTTGGTTGTGAAGAGGAGTGATAGACGTGAAAGGAAGAAGGCAAAAGAGGAGAGAGAGCTTGAAATTACTGCTGCTGAAGAGAGAATCTTACAGAAGGATATACCACGTACAGAGGAAGATTTTGAGAAATTGGTGAGGAGCTCCCCTAATAGCAGTTTTGTCTGGGTGCAGTACATGGCCTTTATGGAGTCACTTGCAGATGTTGAGAAGGCACGCTCTATTGCTGAAAGGGCTTTGAGAACAATAAATTTCCGAGAAGAAAATGAAAAGCTTAATATTTGGACAGCTTATTTTAATTTAGAGAACCAATATGGAAATCCTCCCAAGGAGTCTGTTAGAAAAATCTTCCAAAGAGCGCTGCAATACTGTGATCCCAAAAAAGTCCATTTCGCTCTGCTTGGGATGTATGAAAGGACCGAACAGCATGACCTGGCAGAAGATCTTCTTGAAAGAATGGCAAAAAAATTCAAAACTTCATGCAAGATCTGGTTGCATCGTGTGCAAAACCTCTTGAAGCAAGGCAAAGAGGGAATTCAATCGATTGTAAACCGTGCTCTTCTAAGTCTTCCTCGCAAAAAACACATCAAATTTATCTCACAGACTGCAATTCTGGAGTTCAAATGTGGCTTACCTGATCGAGGTAGGTCAATGTTTGAAGGTGTGCTGCGGGAGTATCCTAAGAGAACAGATCTTTGGAGTATTTACCTTGATCAGGAGATCCGACTAGGCGATCCAGATGTCATTCGAGCATTATTTGAGAGGGTAACCTGTTTAAGCCTTCCTCCGAGGAAAATTGAGTTTTTATTCAAGAAGTATCTCAACTACGAAAAGTCACAAGGTGATGAAGAGAGGATTGAACATGTCAAGAGAAAAGCAATAGAATATGCTGAGAGCTTGAAATGA

Protein:   MAAHGEKKKKSQKQNPNHLAPKSQKPFKRSKKEKIPKEPASTDSLSTSLLVQDDDPEFPRGGGSVLSRKEEAEARAEAEAEFEKEKKEFRKGKDRRKKKNERKKPAKGADDELGSLFGEGVTGRLPKFANRITLKNISPNMKLWGVIVEVNQKDLVIGLPGGLRGFVRTEDVSDIVLDNVDKDTETYILPSIFHVGQLVSCIVLTVDDDKREGSGQKRIWLSLHLSLLYKGLTLDAVQDGMVLTAQVKSVEDHGYILHFGVPLFTGFLPRSGQGGGKFLKGQLLQCAVKSVDKVRTVVYLNADPDLVSKYVAKDLKGISIDLLVPGMMVNARIHSILENGIMLCFLTYFTGTVCFFEYDQNKKVNARILFIDPSSRAIGLTLNSYHIQNKVPPSHVKTGDIYDNSRILRVDRGIGLLLEIPSSPKPTPAYVNIFDVADEEGLKLEKKFREGSEVRVRVTGIKHLEGLAMGTLKGSAFEGSVFTHSDVKPGMLLKAKVIAVENFGAIVQFASGIKALCPLPHMSELDIMKPPKKFKVGAELPFRVLGCKSKRITVTHKKTLVKSKLNILASYADATEGLITHGWITKIEKHGCFVKFYNGVQGFAHRSELALDPGSEADAVYHVGQVVKCRIISSVVASHNINLSFVTSPKRVCQDDVTKIGSVVSGIVERLTASGVILHVDNAVYMKGMIPDEHLTDHRGQAMMFKSLLRPGYKFDQLLVLDIEGQNLVLSAKYSLLCSLQEIPSEVSQIRPLSVLHGYICNVIEAGCFVRFLGRLTGFSPKYKVADEKIDNLLDAFSVGQSVRSYILNVNSETGRIKLSLKQSLCFSTDVSFIQSYFLMEEKIAKLQFSDAKISDLRWLESFNIGAVVEGEVQEMKEFGSVLSFKDHPDIVGFIANQHLGGSQLEKGSVVKAFVLDIAKSEGLVDLSLKTELVDRANIGASKNLSSKKKRRRDRSTDLELQQTVNTIVEIVKENYLVLSIPEHNYAIGYASLLDYNTQKLSPRHFHYGQSVVATVGEVPSPDSLGRLLLLLKCTTEVLKTSSSKRTKKAPNYVVGSLVDAEVIDIKPLELVVKFGTGLHGRVHITEVAEDGHSLDNMLSKFRIGQLVNARIVSKAQSGKKGKGYEWELSLRPSVLSGSAQMISGEFNFSVGNIVSGYVSKVDNEWVWLTVSRNVRAHIYILDSSSEPSELQEFGKLYTVGRAVEGRIIGMHKEKRLLRLCPSISSLADRGSSAKEIEESNVSDATGLEHIMQGDLIGGRIKKVLPGVGGLLVQIGPHRHGRVHYTELLDTWASNPLSRYEEGQFVKCKVLEISRSSDGLLHVDLSLRTSLMGINSTIGSDSMDSILERFENIEDLHPNMEVKGYVKNVTTKGCFIMLSRRIDARVLLSNLSDDYIDTPEKEFPVGLLVHGRVLSVDSSSKRVDVTLKKDTESQRVKSDTSSFLNVKVGDVISGLIRRTEPYGLFIKIDNTSMVGLCHISEVSDEHLDKIEGKYQAGERVVAKVLKVDEERRRISLGMKKSYIGDTNHGQTVSGHSENDKTADDPVVMYDSLPTMQQNDDSPLIQEIFNCEDDPAVLSQVQTRASVLPLQVSLDQSDSSDMEDASEKQDSIGQNNLVVKRSDRRERKKAKEERELEITAAEERILQKDIPRTEEDFEKLVRSSPNSSFVWVQYMAFMESLADVEKARSIAERALRTINFREENEKLNIWTAYFNLENQYGNPPKESVRKIFQRALQYCDPKKVHFALLGMYERTEQHDLAEDLLERMAKKFKTSCKIWLHRVQNLLKQGKEGIQSIVNRALLSLPRKKHIKFISQTAILEFKCGLPDRGRSMFEGVLREYPKRTDLWSIYLDQEIRLGDPDVIRALFERVTCLSLPPRKIEFLFKKYLNYEKSQGDEERIEHVKRKAIEYAESLK